Undergraduate, B.S. Computer Science and B.S. Biological Sciences
University of Maryland, College Park · Expected May 2027
bds062@umd.edu · GitHub · LinkedIn · Google Scholar · Resume (PDF) (updated Oct 2026)
I am an undergraduate at the University of Maryland, College Park, studying Computer Science and Biological Sciences in the Gemstone Honors Program. I work with Prof. Can Firtina on raw signal analysis methods, including RawMod, which detects DNA base modifications from raw nanopore signals, even modifications it was never trained on. I also work with Prof. Abhinav Shrivastava on FSH-TAL, which identifies and localizes social behaviors in hours of video of genetically modified cichlid fish. This work speeds up the Juntti Lab's studies of how genes shape social behavior.
My research interests lie in developing new machine learning methods and applying them to biology. I am interested in combining genomic and imaging data for multimodal systems, learning from sparse labels, and building interpretable models for biological insights. My broader goal is to understand genomic variation across these types of data.
Previously, I was a Student Intern in the Kolmogorov Lab in the Cancer Data Science Laboratory at the National Cancer Institute, where I developed a deep learning method to find complex structural variants in cancer genomes. Before that, I was a Bioinformatics Intern at AstraZeneca. Outside of research, I enjoy racquetball, music, and board games. Fun fact: I've won four intramural racquetball championships at UMD!
I am applying to Computer Science and Computational Biology Ph.D. programs for Fall 2027.
Paper "RawMod: Modification-Agnostic Detection of DNA Base Modifications from
Nanopore Signal Pileups" is preprinted and in review.
Preprint (bioRxiv) · Project page ·
LinkedIn Post
Paper "Automated Temporal Localization of Behavior in Cichlid Fish with Few-Shot
Trajectory Tokens" accepted to WACV 2027.
Paper (PDF) ·
Project page
Paper "Automated Temporal Localization of Behavior in Cichlid Fish with Few-Shot
Trajectory Tokens" accepted to the
Computer Vision for Ecology Workshop
at ECCV 2026.
Workshop paper (PDF)
Best Poster Award, HiTSeq, ISMB, for RawMod: A Deep Learning Approach to
Modification Agnostic Classification in Nanopore Sequencing.
Poster (PDF) ·
ISMB Award Announcement ·
LinkedIn Post
Best Poster Award, Entomological Society of Washington Student Showcase,
for Correlations between Read Depth, Copy Number Variation, and Bt Resistance in
Helicoverpa zea.
Poster (PDF) ·
UMD Entomology Award Announcement
2nd Prize, Crop Science Society of America Poster Competition, PAG33,
for Correlations between Read Depth, Copy Number Variation, and Bt Resistance in
Helicoverpa zea.
Poster (PDF) ·
PAG33 Award Announcement
Best Talk Award, University of Maryland Gemstone Library Awards, for
Investigating the Link between the Ora4 Gene and Social Behaviors in African Cichlids.
Awarded $2,000 in research funding.
LinkedIn Post